Insertion junction: CLIP2.073180_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.073180
Chromosome:chromosome 9
Location:3543718
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g396512 OPR12 OctotricoPeptide Repeat protein 12 outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAGAACTCAGGGGTGCCACTCTTGCACCCGGCGAGCCTCTCGCAGTTTGA
Internal bar code:GCCGGAGTTTAGGGGGTTTGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:1241
LEAP-Seq percent confirming:95.8333
LEAP-Seq n confirming:23
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:24

Suggested primers for confirmation by PCR

Suggested primer 1:CGGACTGTCCCGTCTTTGAA
Suggested primer 2:CTGAGGGATGGGCTGCTATG