Insertion junction: CLIP2.073183_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.073183
Chromosome:plastome
Location:5010
Confidence (%):63
Locus systematic id Locus common name Defline Feature
CreCp.g802264 petD,ChreCp002,2717021 cytochrome b6/f complex subunit 4; (1 of 1) K02637 - cytochrome b6-f complex subunit 4 (petD) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACATGTTCCCTGTTGTTATTTTAGGTACATTTGCATGTGTTATTGGTTTA
Internal bar code:TACTAAAGCGGTTAGGCCTATC

Confirmation - LEAP-Seq

LEAP-Seq distance:93
LEAP-Seq percent confirming:9.30233
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:39
LEAP-Seq n unique pos:43

Suggested primers for confirmation by PCR

Suggested primer 1:ACGAGTGGCTGAAAGTGACC
Suggested primer 2:CCCCTTCGGGCAAGTAAACT