Insertion junction: CLIP2.073185_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.073185
Chromosome:chromosome 1
Location:4820446
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g033550 PDI2 (1 of 1) PTHR18929:SF87 - PROTEIN C03H12.1, ISOFORM A; Protein disulfide isomerase 2 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GATTGTGTGATTGCGGGAGGGATGTCCAGCCGCCCAATTTTGTTGGTAAT
Internal bar code:GTTCCTGCAGGACTTACCCGGC

Confirmation - LEAP-Seq

LEAP-Seq distance:1201
LEAP-Seq percent confirming:96.5517
LEAP-Seq n confirming:28
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:29

Suggested primers for confirmation by PCR

Suggested primer 1:TGCGCATGTGTTGAATGTGG
Suggested primer 2:CCTCCTTCTCCTCCTCCTCC