Insertion junction: CLIP2.073185_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.073185
Chromosome:chromosome 1
Location:6161330
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g043817 5'UTR_intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCAAGTTGGACTGCTTGGACTGGGGCAGACGTATTTACTGCGGCTGGTG
Internal bar code:TGTGTCGGGCCTGCCGCTATTA

Confirmation - LEAP-Seq

LEAP-Seq distance:1338
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:21
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:CCGTTGCATTACGCTAGTGC
Suggested primer 2:TCGTGGGTGTACTTCTTGCC