Insertion junction: CLIP2.073188_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.073188
Chromosome:chromosome 12
Location:3311036
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g498850 CEP12 Cysteine endopeptidase; (1 of 3) 3.4.18.1 - Cathepsin X / Lysosomal carboxypeptidase B 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCGAGCGTGGGCTTGTGTTGCACAAACCTCGTCCAAACCACACATGAAA
Internal bar code:CAGGTAGTTGATCTACCATTGT

Confirmation - LEAP-Seq

LEAP-Seq distance:3651
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:72
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:72

Suggested primers for confirmation by PCR

Suggested primer 1:TAGCAGCTCTTGGGGCTAGA
Suggested primer 2:ACTGGTGCTTCCTTCTGCTC