Insertion junction: CLIP2.073190_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.073190
Chromosome:chromosome 9
Location:149753
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g386731 (1 of 2) K13095 - splicing factor 1 (SF1) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGGGGAGTCTTCGGAACCATGATGGCGGGAAGAGACCTCCATCCATGCAC
Internal bar code:CCTGTAGGGTGCACCGTGTGCG

Confirmation - LEAP-Seq

LEAP-Seq distance:827
LEAP-Seq percent confirming:53.5714
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:13
LEAP-Seq n unique pos:28

Suggested primers for confirmation by PCR

Suggested primer 1:CTTCCAGAAGACCGCAGTGT
Suggested primer 2:GTGGATACGACGGCTACGG