Insertion junction: CLIP2.073192_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.073192
Chromosome:chromosome 17
Location:4139837
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre17.g729101 PHC37 (1 of 24) IPR003882//IPR024616 - Pistil-specific extensin-like protein // Pherophorin; Putative pherophorin-chlamydomonas homolog CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACTTGTCGGTGCACTCGTCCTGGTCCGTCACCGAGCGGCCGCACAGCAG
Internal bar code:TTGTTCGGCAGAAGGTTTCGTC

Confirmation - LEAP-Seq

LEAP-Seq distance:249
LEAP-Seq percent confirming:16.6667
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:CTGGCGTCACCCCTAATTGT
Suggested primer 2:GAGAGGGAGGAGGAGGAGAG