Insertion junction: CLIP2.073195_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.073195
Chromosome:chromosome 1
Location:4215989
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g028450 (1 of 1) PTHR30544//PTHR30544:SF2 - 23S RRNA METHYLTRANSFERASE // SUBFAMILY NOT NAMED 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAAAACGCACTCCCGCACGGCCGCACCGTGCCGCTGGCCTCATTACTTTC
Internal bar code:GTATTTTCTGGGACGGGCCCCC

Confirmation - LEAP-Seq

LEAP-Seq distance:383
LEAP-Seq percent confirming:94.7368
LEAP-Seq n confirming:18
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:CCTGTGTCTAGGGAGGAGCT
Suggested primer 2:AATAGGCAGGGAGGGGTGAT