Insertion junction: CLIP2.073195_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.073195
Chromosome:chromosome 1
Location:4215994
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g028450 (1 of 1) PTHR30544//PTHR30544:SF2 - 23S RRNA METHYLTRANSFERASE // SUBFAMILY NOT NAMED 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTTTGATCCTGTGACGAGGGGCTGGGTGCACGAGGTGGCATCACAAGCAT
Internal bar code:GTATTTTCTGGGACGGGCCCCC

Confirmation - LEAP-Seq

LEAP-Seq distance:799
LEAP-Seq percent confirming:64.4068
LEAP-Seq n confirming:38
LEAP-Seq n nonconfirming:21
LEAP-Seq n unique pos:59

Suggested primers for confirmation by PCR

Suggested primer 1:AATAGGCAGGGAGGGGTGAT
Suggested primer 2:CCTGTGTCTAGGGAGGAGCT