Insertion junction: CLIP2.073198_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.073198
Chromosome:chromosome 7
Location:675144
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g317250 CHI5 (1 of 2) K01183 - chitinase (E3.2.1.14); Chitinase-like hydrolase 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AATACCGCCTGCAACTTCGTGCTCGGCGTCTCGGATGTGTGACTGAATCC
Internal bar code:TATCTTCATCACGACTTAGCAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1173
LEAP-Seq percent confirming:66.6667
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:CAGCGCTTTAGCCCTCGATA
Suggested primer 2:TGCTGAGCTTGTAGGAGTGC