Insertion junction: CLIP2.073209_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.073209
Chromosome:chromosome 4
Location:2486456
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g222000 (1 of 2) PTHR22847//PTHR22847:SF459 - WD40 REPEAT PROTEIN // SUBFAMILY NOT NAMED 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCTTTTGGAAGAGGGATCGGTGGCATATGTGCCAAGCATGCATGGGACAG
Internal bar code:GGATTTTGCAAATCTGTTGTCC

Confirmation - LEAP-Seq

LEAP-Seq distance:2040
LEAP-Seq percent confirming:88.4615
LEAP-Seq n confirming:23
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:26

Suggested primers for confirmation by PCR

Suggested primer 1:TGTAGCGGCACATGAGTTGT
Suggested primer 2:CCACTTTGTGAACAGCGTGG