Insertion junction: CLIP2.073216_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.073216
Chromosome:chromosome 6
Location:4669596
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g278585 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGGCCGATGTGAATGTGCCGGCTGCCATGGCCGTACGCCCGTACCCGTG
Internal bar code:CTAACATATAGATTCAGGTATC

Confirmation - LEAP-Seq

LEAP-Seq distance:1027
LEAP-Seq percent confirming:92.8571
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:CCTCTTACACAGCACCGGTT
Suggested primer 2:ATTCACTGGGGCTGGACATG