Insertion junction: CLIP2.073221_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.073221
Chromosome:chromosome 6
Location:5753616
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre06.g288650 (1 of 2) PTHR32100//PTHR32100:SF10 - FAMILY NOT NAMED // OMEGA-6 FATTY ACID DESATURASE, CHLOROPLASTIC; Putative Omega-6 fatty acid desaturase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGTGCATGTACCACAGCCAGCCGTACCCAGCCGCCATGGCCGCAAGCGG
Internal bar code:ACCCTAATAGAGCCGCACTGAT

Confirmation - LEAP-Seq

LEAP-Seq distance:416
LEAP-Seq percent confirming:6.66667
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:14
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:CAGCCAGTAACCTCCACGAG
Suggested primer 2:AAGTCCAGCCTTCTCGTTGG