Insertion junction: CLIP2.073224_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.073224
Chromosome:chromosome 9
Location:4926671
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre09.g403182 SPT6 (1 of 1) K11292 - transcription elongation factor SPT6 (SUPT6H, SPT6) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGGGGCAGGGCCAGGGGCAGTGGCAGGGGCAGGGGCAGGGGTCGCCTCCT
Internal bar code:TCGTGGCAACACTTGGTGAGAC

Confirmation - LEAP-Seq

LEAP-Seq distance:217
LEAP-Seq percent confirming:25.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:CAACCCTCAAAACCACGCAG
Suggested primer 2:CTCTCGCGGGTGTACATCTC