Insertion junction: CLIP2.073226_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.073226
Chromosome:chromosome 6
Location:6738208
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g295550 (1 of 1) IPR006045//IPR011051//IPR013096 - Cupin 1 // RmlC-like cupin domain // Cupin 2, conserved barrel 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCATCCCCAACAGTAATGGCTCTTCCACACGCTCGCGTGTCAATGCGAAC
Internal bar code:AGCGAGGTACACTACCAATCTC

Confirmation - LEAP-Seq

LEAP-Seq distance:4803
LEAP-Seq percent confirming:97.1429
LEAP-Seq n confirming:34
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:35

Suggested primers for confirmation by PCR

Suggested primer 1:TCATGCCCGTACCTCTCTCA
Suggested primer 2:ATCACACAAGTCCGCACGAT