Insertion junction: CLIP2.073232_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.073232
Chromosome:chromosome 17
Location:526948
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g699350 SMM51 (1 of 13) PF12847 - Methyltransferase domain (Methyltransf_18); S-adenosyl-L-methionine-dependent methyltransferase 3'UTR
Cre17.g699400 (1 of 6) PTHR10994//PTHR10994:SF72 - RETICULON // SUBFAMILY NOT NAMED 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAATATGAATAAGGATGTCATGTGATTCCCTGCGTCTCATCGTGCTGGCG
Internal bar code:ATAGTTGACATGACCGCTAGAA

Confirmation - LEAP-Seq

LEAP-Seq distance:1873
LEAP-Seq percent confirming:25.2632
LEAP-Seq n confirming:24
LEAP-Seq n nonconfirming:71
LEAP-Seq n unique pos:95

Suggested primers for confirmation by PCR

Suggested primer 1:GTTGGCGTAAGGGTGAGGAA
Suggested primer 2:CCTTGGTACTGCCTAGCTGG