Insertion junction: CLIP2.073236_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.073236
Chromosome:chromosome 9
Location:6173218
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g413150 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTTCAAGGTGACGTAAAGCGTTTTCTTATTTGGACACCCAGCATAGCAAA
Internal bar code:TCATTAATTAATAAAAAAGTTC

Confirmation - LEAP-Seq

LEAP-Seq distance:417
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:TCCCTCGTTCACTCTTGTGC
Suggested primer 2:TCAGACTGCCCCCACGTATA