Insertion junction: CLIP2.073237_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.073237
Chromosome:chromosome 17
Location:1436666
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g706400 (1 of 781) IPR000104 - Antifreeze protein, type I 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCACCCTCGACAGGCAAGTCTCTGACCGTGACCAGCAGGACCAAGCTTCA
Internal bar code:TTGGAAAAGAGCTCGCACGTCA

Confirmation - LEAP-Seq

LEAP-Seq distance:142
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:GCAACCGTGTCTGCACATTT
Suggested primer 2:TGCCAGTCAAAACACCCACT