Insertion junction: CLIP2.073242_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.073242
Chromosome:chromosome 3
Location:8333754
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre03.g199150 (1 of 1) PTHR12126//PTHR12126:SF1 - NADH-UBIQUINONE OXIDOREDUCTASE 39 KDA SUBUNIT-RELATED // SUBFAMILY NOT NAMED; NAD dependent epimerase/dehydratase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCGACAATGCAACGCACACCAACAATAACTACTTGAACGAGCGATCAGCT
Internal bar code:AATACCTTTACTATATTACTGC

Confirmation - LEAP-Seq

LEAP-Seq distance:1201
LEAP-Seq percent confirming:9.09091
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:10
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:TTGCCTGCATGTTCCAAACG
Suggested primer 2:TTACCGGGTACTTGCACACC