Insertion junction: CLIP2.073254_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.073254
Chromosome:chromosome 5
Location:3667186
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre05.g800583 (1 of 12) IPR011010//IPR013762 - DNA breaking-rejoining enzyme, catalytic core // Integrase-like, catalytic domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCAGCTGACCCAGCCGGCCCAGCTGACCCAGCCCGCCCCCTCCCCACCC
Internal bar code:TCCTATTAAGACGGACACCTTT

Confirmation - LEAP-Seq

LEAP-Seq distance:71
LEAP-Seq percent confirming:4.7619
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:20
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:TCCGTTACGTGCAGCACTAG
Suggested primer 2:AGCCCCTAGTGCTGTACGTA