Insertion junction: CLIP2.073255_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.073255
Chromosome:chromosome 7
Location:668948
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g317250 CHI5 (1 of 2) K01183 - chitinase (E3.2.1.14); Chitinase-like hydrolase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTACCGTGCAGGTGACCAGCTTGAGAGGAGCCAACCCGAGGAAGGCCTCC
Internal bar code:CGACGGTCATCTTTTTTCAGAT

Confirmation - LEAP-Seq

LEAP-Seq distance:3035
LEAP-Seq percent confirming:88.8889
LEAP-Seq n confirming:64
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:72

Suggested primers for confirmation by PCR

Suggested primer 1:AGGACTTGATTGCATGCGGA
Suggested primer 2:GTAGGTCGCCTACGTCGAAG