Insertion junction: CLIP2.073262_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.073262
Chromosome:chromosome 8
Location:1523282
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g365000 CSE1 Protein of unknown function; (1 of 3) PF07887 - Calmodulin binding protein-like (Calmodulin_bind) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCTTTCCGACTCTTCTGGTGCCCTTACCGTCTACGTGTGATGGGGGTCCT
Internal bar code:CAAGCAAAGTTGTAGTGTTTAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1355
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:CGGCATCATCACACATGCTG
Suggested primer 2:GTGAGGGCCTAGGTATTGCC