Insertion junction: CLIP2.073268_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.073268
Chromosome:chromosome 1
Location:4018378
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g026400 EXS1 (1 of 1) PF03124 - EXS family (EXS); ERD1 homolog 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAAAGCAAGCAGGACGCGGCTGGAAACTGCGGCACGCCCCATACCTACGC
Internal bar code:TGTTAATCTCTCTCAATTCGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1126
LEAP-Seq percent confirming:16.6667
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:25
LEAP-Seq n unique pos:30

Suggested primers for confirmation by PCR

Suggested primer 1:AACACCTCGGCTCTATCCCT
Suggested primer 2:CACCTCAGTTGGCTTTGTGC