Insertion junction: CLIP2.073282_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.073282
Chromosome:chromosome 8
Location:125889
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g358534 (1 of 2) IPR000679//IPR001025 - Zinc finger, GATA-type // Bromo adjacent homology (BAH) domain 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGAAGGCGCAGGACTCTAGCTGATGCTGTTGCCTGCAATTACTTCGTTT
Internal bar code:GTTAAGGAACTGTCTCGTGAAC

Confirmation - LEAP-Seq

LEAP-Seq distance:1172
LEAP-Seq percent confirming:97.619
LEAP-Seq n confirming:41
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:42

Suggested primers for confirmation by PCR

Suggested primer 1:GCGAATTCATGACACGCCTC
Suggested primer 2:CGTGTTAGAAAGCAGCGACG