Insertion junction: CLIP2.073288_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.073288
Chromosome:chromosome 3
Location:4357732
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g174700 (1 of 1) 3.1.22.1 - Deoxyribonuclease II / Lysosomal DNase II 3'UTR
Cre03.g174750 CYN26,CYN26B,CYN26-2 (1 of 1) PTHR11071//PTHR11071:SF244 - PEPTIDYL-PROLYL CIS-TRANS ISOMERASE // CYCLOPHILIN-LIKE PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FAMILY PROTEIN; Cyclophilin 26-2 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGCAATTACAGCAACGCATTGCCTGTTGATCCTCTTCAGGCAGGTGCGGA
Internal bar code:CGTGTTTCAACGGTTTTGTGAC

Confirmation - LEAP-Seq

LEAP-Seq distance:1109
LEAP-Seq percent confirming:80.5195
LEAP-Seq n confirming:62
LEAP-Seq n nonconfirming:15
LEAP-Seq n unique pos:77

Suggested primers for confirmation by PCR

Suggested primer 1:GGGGTGGGACTCATTGAAGG
Suggested primer 2:GGTTGTGGTGTTCGTGTTGG