Insertion junction: CLIP2.073290_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.073290
Chromosome:chromosome 6
Location:1992102
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g265000 HTR13 Histone H3; (1 of 35) K11253 - histone H3 (H3) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGCCGCCTGGTTTGCCCCTGTGCAAAGGCTGTGCTCTACCTTTCAACAA
Internal bar code:CTGTCCGCTTTTTCGTTCTGAA

Confirmation - LEAP-Seq

LEAP-Seq distance:4277
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:67
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:67

Suggested primers for confirmation by PCR

Suggested primer 1:AGCCTGCTCAATCGTTCACA
Suggested primer 2:CGGATAGCGGGCTTGGTAAT