Insertion junction: CLIP2.073290_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.073290
Chromosome:chromosome 6
Location:1992152
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g265000 HTR13 Histone H3; (1 of 35) K11253 - histone H3 (H3) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTCCTTGGGCATGATCGTCACACGCTTGGCGTGGATGGCGCACAGGTTGG
Internal bar code:GTACGAAACAAAGTTCGATGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:3288
LEAP-Seq percent confirming:86.3636
LEAP-Seq n confirming:38
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:44

Suggested primers for confirmation by PCR

Suggested primer 1:CGGATAGCGGGCTTGGTAAT
Suggested primer 2:AGCCTGCTCAATCGTTCACA