Insertion junction: CLIP2.073309_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.073309
Chromosome:chromosome 17
Location:3616612
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g725250 (1 of 39) IPR009003 - Peptidase S1, PA clan 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAAGCCAACTGGGAGAGAACCAGACTTACCCGCGTCCCTAGTAGTTGTCT
Internal bar code:GAATTTGTTTAGGAGAAGTATC

Confirmation - LEAP-Seq

LEAP-Seq distance:2309
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:49
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:49

Suggested primers for confirmation by PCR

Suggested primer 1:TAAAGCGTGAGTGCCTGAGG
Suggested primer 2:TGACGAAACCTTGGAGACCG