Insertion junction: CLIP2.073311_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.073311
Chromosome:chromosome 9
Location:950883
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre09.g402800 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCGCCGCGTCCGCCTCCAACTTGCTCTGTGCGCGTGTGATTGGGATTGT
Internal bar code:TGATCTAGAATGTCATCTTGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:327
LEAP-Seq percent confirming:36.3636
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:CCAGTCCTGCAGTACCAGTG
Suggested primer 2:GCATATGCACCAGTTCGCAG