Insertion junction: CLIP2.073315_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.073315
Chromosome:chromosome 6
Location:5693706
Confidence (%):80
Locus systematic id Locus common name Defline Feature
intergenic

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTATCCATGGAAATCCCCTCGACCCAGACCACCCCGCGCTCAACTCTCTG
Internal bar code:TTTCTTGCGGAGAACTGGTTGT

Confirmation - LEAP-Seq

LEAP-Seq distance:2445
LEAP-Seq percent confirming:76.4706
LEAP-Seq n confirming:52
LEAP-Seq n nonconfirming:16
LEAP-Seq n unique pos:68

Suggested primers for confirmation by PCR

Suggested primer 1:CGGGAGACTTGCCCAATCTT
Suggested primer 2:GAAGGGGTGCGTGTCTGTTA