Insertion junction: CLIP2.073320_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.073320
Chromosome:chromosome 9
Location:208366
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g386743 (1 of 1) 2.1.1.305 - 8-demethyl-8-alpha-L-rhamnosyl tetracenomycin-C 2'-O-methyltransferase 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACATGCTTTGCTTAACATTGTTTGACTTTGCACATTTGAAACTGGCATCG
Internal bar code:ATTGTCGAGCTGGTGGGCGTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1820
LEAP-Seq percent confirming:55.5556
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:GATATGTGCACGCGTGTTCC
Suggested primer 2:GAACAACCTCATCGCCCAGA