Insertion junction: CLIP2.073327_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.073327
Chromosome:chromosome 11
Location:2238199
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g467719 5'UTR
Cre11.g467720 (1 of 55) PTHR23257//PTHR23257:SF394 - SERINE-THREONINE PROTEIN KINASE // SUBFAMILY NOT NAMED 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TATAGAGCTTTCATCGCAGCCGATAACGCTGGGATGTCACGGCTATCAGC
Internal bar code:CCGCTGTGAGAACTGAGTAGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:1127
LEAP-Seq percent confirming:82.6087
LEAP-Seq n confirming:19
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:23

Suggested primers for confirmation by PCR

Suggested primer 1:CAACATGCCACCTGGTTTGG
Suggested primer 2:CAGCTCTTGTTGCTCGAGGA