Insertion junction: CLIP2.073327_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.073327
Chromosome:chromosome 11
Location:2238203
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g467719 5'UTR
Cre11.g467720 (1 of 55) PTHR23257//PTHR23257:SF394 - SERINE-THREONINE PROTEIN KINASE // SUBFAMILY NOT NAMED 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCAGTAATTGAACGGCATGCTTGGAGGTCGTCTTCAAGGCAGACTCGCT
Internal bar code:AGAAGAGCTACAGATAGGTCTT

Confirmation - LEAP-Seq

LEAP-Seq distance:1222
LEAP-Seq percent confirming:68.75
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:CAGCTCTTGTTGCTCGAGGA
Suggested primer 2:CAACATGCCACCTGGTTTGG