Insertion junction: CLIP2.073328_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.073328
Chromosome:chromosome 17
Location:1187094
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g704550 HRF1 (1 of 1) PTHR14083:SF0 - PROTEIN YIF-1, ISOFORM B; HRF1 homolog 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCTGAACTCTCCACCTCCACCTTCACCTCCTCCACCCTCAACCCACCAAC
Internal bar code:GCGTGCCTACGGAAAGTTGGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:1110
LEAP-Seq percent confirming:93.75
LEAP-Seq n confirming:45
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:48

Suggested primers for confirmation by PCR

Suggested primer 1:AAGGAACGGATGTCCTGCAG
Suggested primer 2:CGTCAGCCATGCCTAATTGC