Insertion junction: CLIP2.073328_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.073328
Chromosome:chromosome 17
Location:1187099
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g704550 HRF1 (1 of 1) PTHR14083:SF0 - PROTEIN YIF-1, ISOFORM B; HRF1 homolog 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCAGAAGGGGGGGGGTCGCAGCTGCTGGGGGGATGTGGAATTGCGAGTGA
Internal bar code:GCGTGCCTACGGAAAGTTGGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:242
LEAP-Seq percent confirming:60.0
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:CGTCAGCCATGCCTAATTGC
Suggested primer 2:AAGGAACGGATGTCCTGCAG