Insertion junction: CLIP2.073330_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.073330
Chromosome:chromosome 1
Location:4449315
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre01.g030450 (1 of 1) IPR006615//IPR028881//IPR028889//IPR029071 - Peptidase C19, ubiquitin-specific peptidase, DUSP domain // PAN2 domain // Ubiquitin specific protease domain // Ubiquitin-related domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCATCCAGTCACCTGCACTGACGCGCACCTATCTCCAAGCCCTTGCAAAG
Internal bar code:CGTAATGTGGGGGATGGGGGGC

Confirmation - LEAP-Seq

LEAP-Seq distance:871
LEAP-Seq percent confirming:80.0
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:TGTTCTCCATCCCCTCGCTA
Suggested primer 2:CCAACGCGTTAGCATGCTAC