Insertion junction: CLIP2.073331_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.073331
Chromosome:plastome
Location:19180
Confidence (%):40
Locus systematic id Locus common name Defline Feature
CreCp.g802270 petB,ChreCp008,2717017 cytochrome b6; (1 of 1) K02635 - cytochrome b6 (petB) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GATGCGAAAGCTTCTGCTACTGTTGGACGGTAGTAGAAAGTCATAGCAAA
Internal bar code:TGGTTCATCATTATAGGAAGTT

Confirmation - LEAP-Seq

LEAP-Seq distance:231
LEAP-Seq percent confirming:56.7568
LEAP-Seq n confirming:21
LEAP-Seq n nonconfirming:16
LEAP-Seq n unique pos:37

Suggested primers for confirmation by PCR

Suggested primer 1:CCCCTTCGGGCAACTAAAGT
Suggested primer 2:GCTTGACCAACACCAACACC