Insertion junction: CLIP2.073342_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.073342
Chromosome:chromosome 6
Location:6100867
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g291150 HEL29 (1 of 5) K12823 - ATP-dependent RNA helicase DDX5/DBP2 (DDX5, DBP2); DEAD/DEAH box helicase 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGATTGCAAGATGGATAGTCCGGCAATTGACATGCATGCGTGGCCACGAA
Internal bar code:CGAGCGGCTCACAACTTTTCTA

Confirmation - LEAP-Seq

LEAP-Seq distance:3379
LEAP-Seq percent confirming:92.4242
LEAP-Seq n confirming:61
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:66

Suggested primers for confirmation by PCR

Suggested primer 1:GACTTCGTTACGGGCACAGA
Suggested primer 2:GTACGACGCATGATTTGGGC