Insertion junction: CLIP2.073346_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.073346
Chromosome:chromosome 6
Location:3654286
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g278144 (1 of 13) PF01789 - PsbP (PsbP) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGACATGACGAGCAGGGCCAAGGCGTCTGGAGGTGACGTGCACGGTACT
Internal bar code:CGCCGAAATGGAATGACTGGCT

Confirmation - LEAP-Seq

LEAP-Seq distance:1528
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:AAGCTGCCATTACCCCCTTC
Suggested primer 2:TATCACCTTCCCCAGCGAGA