Insertion junction: CLIP2.073353_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.073353
Chromosome:chromosome 14
Location:1944611
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre14.g801623 (1 of 1) IPR006119 - Resolvase, N-terminal catalytic domain 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGAGTCCGGAGGCGCTTGATAGCAAAAAGCAAAGTGTCTTCTAAAGCGT
Internal bar code:ACTCCCCGGTTATAGCCCTGCG

Confirmation - LEAP-Seq

LEAP-Seq distance:2577
LEAP-Seq percent confirming:50.0
LEAP-Seq n confirming:18
LEAP-Seq n nonconfirming:18
LEAP-Seq n unique pos:36

Suggested primers for confirmation by PCR

Suggested primer 1:TGTTCGATCTCGCCACAACA
Suggested primer 2:CACAAACAAAGCGTGGGAGG