Insertion junction: CLIP2.073355_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.073355
Chromosome:chromosome 5
Location:2273855
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g238100 PTK25 (1 of 66) 2.7.12.1 - Dual-specificity kinase; Protein tyrosine kinase 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGCGCGAAAGAAGTCGGCAAATCTTGCCTTTGGGACCGTCGAATCGACT
Internal bar code:GGTAATATTACGGATACATTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1540
LEAP-Seq percent confirming:98.0769
LEAP-Seq n confirming:51
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:52

Suggested primers for confirmation by PCR

Suggested primer 1:ACAGCCCCGTACTGAGGTAT
Suggested primer 2:CTTCGTGTCGGAGGAACCTC