Insertion junction: CLIP2.073374_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.073374
Chromosome:chromosome 16
Location:4069576
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g690500 NHP2 Nucleolar protein, Small subunit of H/ACA snoRNPs; (1 of 1) PTHR23105//PTHR23105:SF61 - RIBOSOMAL PROTEIN L7AE FAMILY MEMBER // SUBFAMILY NOT NAMED 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCTTGAGCTAGGGGCAGGAGGAGAGACATACGGATGGCAGCGCCGTTTGC
Internal bar code:GACTGTTTTCAGGTTATGCTTG

Confirmation - LEAP-Seq

LEAP-Seq distance:1831
LEAP-Seq percent confirming:93.617
LEAP-Seq n confirming:44
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:47

Suggested primers for confirmation by PCR

Suggested primer 1:GCCCAGTAAGGTGCTTCTGT
Suggested primer 2:GAAGCTGCTTGTGTGTGGTG