Insertion junction: CLIP2.073376_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.073376
Chromosome:chromosome 16
Location:6389881
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g675400 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCGCGCCAACGCGTAGGCGCCCCTGTTGCCGCTCAAATCGGTCGCTCTGC
Internal bar code:CATATCATGAATATTACTCTAT

Confirmation - LEAP-Seq

LEAP-Seq distance:402
LEAP-Seq percent confirming:44.4444
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:CCCAAAACCACATGCAGGTG
Suggested primer 2:GAGTCGCAGATATGCCGTGA