Insertion junction: CLIP2.073384_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.073384
Chromosome:plastome
Location:91407
Confidence (%):63
Locus systematic id Locus common name Defline Feature
CreCp.g802302 pafII,ycf4 photosystem I assembly factor II; (1 of 1) PF02392 - Ycf4 (Ycf4) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAGCTTCAATATCTTTTAATGAATAAGATAAATCAATTTTACGGTTTTTT
Internal bar code:TCGCGGTTCAGGCCGTCTGGTC

Confirmation - LEAP-Seq

LEAP-Seq distance:74
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:1

Suggested primers for confirmation by PCR

Suggested primer 1:CGTTCATTGCCGTCCTTTGG
Suggested primer 2:GCTTGTGCTGACATGCCATT