Insertion junction: CLIP2.073387_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.073387
Chromosome:plastome
Location:119200
Confidence (%):40
Locus systematic id Locus common name Defline Feature
CreCp.g802312 psaB,ChreCp048,2717038 photosystem I P700 apoprotein A2; (1 of 1) K02690 - photosystem I P700 chlorophyll a apoprotein A2 (psaB) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGTATGCGTACAAATCAAGATTTATACGTAGGTTCTGTATTCTTAGCTTT
Internal bar code:GGAGATTGTGTTCGGTGGGTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:393
LEAP-Seq percent confirming:50.0
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:AGCTTGCATACGGTGACCAA
Suggested primer 2:TTCCCACAGGATTATGGCGT