Insertion junction: CLIP2.073395_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.073395
Chromosome:chromosome 17
Location:4811362
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre17.g733400 (1 of 4) PF13515 - Fusaric acid resistance protein-like (FUSC_2) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCCCCGACGGTGGTGTCACTTCGCGTCCTTCAGCTTACGTGGGTTGATGG
Internal bar code:GGAGCTGGGGGTCGATGGGAAT

Confirmation - LEAP-Seq

LEAP-Seq distance:136
LEAP-Seq percent confirming:94.7368
LEAP-Seq n confirming:18
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:ATGGCGACTTGGAGGTTGAG
Suggested primer 2:AAGAGTCACGTTGCTCTCCG