Insertion junction: CLIP2.073401_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.073401
Chromosome:chromosome 6
Location:8465585
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre06.g308700 (1 of 1) PTHR31595:SF1 - LONG-CHAIN-ALCOHOL O-FATTY-ACYLTRANSFERASE 1-RELATED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTATTGCGCGTTTCACGATGTGTGCGTGCCGTCAGGTGGCGTTTCCCGT
Internal bar code:AGATGGTTTGGGACGCCACGCT

Confirmation - LEAP-Seq

LEAP-Seq distance:115
LEAP-Seq percent confirming:60.0
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:GAGGAAGACTGCAACCGTGA
Suggested primer 2:GGTTCGTGCGTTATACGTGC