Insertion junction: CLIP2.073411_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.073411
Chromosome:chromosome 3
Location:2887950
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g162500 (1 of 4) IPR011016//IPR013083 - Zinc finger, RING-CH-type // Zinc finger, RING/FYVE/PHD-type 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGGAGCTTCGGGGACGCCGGCTGTTGTAATGTAATGCATCGGATGCATGC
Internal bar code:TGGCATTCGATGCGGGGGGAAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1981
LEAP-Seq percent confirming:94.5946
LEAP-Seq n confirming:35
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:37

Suggested primers for confirmation by PCR

Suggested primer 1:GCGGTTTTACTGTGCGGTTT
Suggested primer 2:TTCAGCCTGGCATCACACAT