Insertion junction: CLIP2.073412_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.073412
Chromosome:chromosome 12
Location:5528357
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g530450 (1 of 4) IPR001841//IPR018957 - Zinc finger, RING-type // Zinc finger, C3HC4 RING-type 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGGCCGTACCTTCGCCTGCGCATCCATGGACCATCGCATGAACACAGCG
Internal bar code:AGGAGGTGATGCGGTAAGCTCA

Confirmation - LEAP-Seq

LEAP-Seq distance:1295
LEAP-Seq percent confirming:68.0
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:25

Suggested primers for confirmation by PCR

Suggested primer 1:TACTGCACTTCACCCCGTTC
Suggested primer 2:CTGAGTTGGACCAGGAGCAG