Insertion junction: CLIP2.073416_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.073416
Chromosome:chromosome 8
Location:539672
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre08.g359567 (1 of 44) IPR000048 - IQ motif, EF-hand binding site 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGACCCCGAAGTCGTTCTCGCACAGCCACAGCGGCCGCGACAGTGCGGG
Internal bar code:GTGTGGTGGACGGTGAGACGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:135
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:TACGTGTTGGGTCTCGTGTG
Suggested primer 2:AGAGTTGCCTGCGTTAGCTT